vipcca
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Tutorials for VIPCCA
Integrating multiple scRNA-seq data
Analysis of VIPCCA integrated result in R
scRNA-seq+scATAC-seq integration
Indices and tables
API
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Tutorials for VIPCCA
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Tutorials for VIPCCA
¶
Integrating multiple scRNA-seq data
Importing vipcca package
Loading data
Data preprocessing
VIPCCA Integration
Loading result
UMAP Visualization
Plot correlation
Analysis of VIPCCA integrated result in R
Required packages
Read h5ad file with R
Calculating kBET
Differential gene analyses
Plotting Enhanced Volcano
scRNA-seq+scATAC-seq integration
Preprocessing with R
Importing vipcca package
Loading data in python
Data preprocessing
VIPCCA Integration
Cell type prediction
Loading result
UMAP Visualization
Indices and tables
¶
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